Can threat to survival increase mutation rates in germline cells?Mutation rate in virusescan a point mutation cause a frameshift?Source for an upper bound in the number of genes based on mutation ratesPoint mutation vs IndelsCan mutation rate be selected for?For long term survival of a species in a harsh environment which is more important-mutation or evolution?Is there an existing database of mutation rates for mitochondrial loci?Can a less fit species evolve from a more fit species, by living at separate places?Does the mutation CCR5-delta 32 increase the genetic info?Are inadvertent environmental catastrophes also examples of natural selection?
Missed the connecting flight, separate tickets on same airline - who is responsible?
Short story with physics professor who "brings back the dead" (Asimov or Bradbury?)
How to get a product new from and to date in phtml file in magento 2
Which industry am I working in? Software development or financial services?
What happens if I start too many background jobs?
How do I tell my manager that his code review comment is wrong?
How to reply this mail from potential PhD professor?
Why wasn't the Night King naked in S08E03?
Would a 1/1 token with persist dying trigger on death effects a second time?
Why is parseInt(021, 8) === 15?
Why is `abs()` implemented differently?
What are the spoon bit of a spoon and fork bit of a fork called?
On which topic did Indiana Jones write his doctoral thesis?
Was Unix ever a single-user OS?
/dev/mem vs /dev/i2c-1
Airbnb - host wants to reduce rooms, can we get refund?
Identifying my late father's D&D stuff found in the attic
Would glacier 'trees' be plausible?
Junior developer struggles: how to communicate with management?
My ID is expired, can I fly to the Bahamas with my passport?
What happens to the Time Stone
Returning the outputs of a nested structure
How can I support myself financially as a 17 year old with a loan?
I caught several of my students plagiarizing. Could it be my fault as a teacher?
Can threat to survival increase mutation rates in germline cells?
Mutation rate in virusescan a point mutation cause a frameshift?Source for an upper bound in the number of genes based on mutation ratesPoint mutation vs IndelsCan mutation rate be selected for?For long term survival of a species in a harsh environment which is more important-mutation or evolution?Is there an existing database of mutation rates for mitochondrial loci?Can a less fit species evolve from a more fit species, by living at separate places?Does the mutation CCR5-delta 32 increase the genetic info?Are inadvertent environmental catastrophes also examples of natural selection?
$begingroup$
Can stress that is related to a threat of survival of a population of animals or plants in some environment, like due to hunger, thirst, fear from predators, etc..; results in an increase in average mutation rate in germline cells of individuals of that population, thereby increasing the likelihood of producing heritable trait(s) that might be beneficial to that population in combating those adverse survival conditions in that environment?
In bacteria this is known as "Stress Induced Mutagensis"
Is there something comparable to that in animals and plants?
evolution mutations sexual-reproduction
$endgroup$
add a comment |
$begingroup$
Can stress that is related to a threat of survival of a population of animals or plants in some environment, like due to hunger, thirst, fear from predators, etc..; results in an increase in average mutation rate in germline cells of individuals of that population, thereby increasing the likelihood of producing heritable trait(s) that might be beneficial to that population in combating those adverse survival conditions in that environment?
In bacteria this is known as "Stress Induced Mutagensis"
Is there something comparable to that in animals and plants?
evolution mutations sexual-reproduction
$endgroup$
add a comment |
$begingroup$
Can stress that is related to a threat of survival of a population of animals or plants in some environment, like due to hunger, thirst, fear from predators, etc..; results in an increase in average mutation rate in germline cells of individuals of that population, thereby increasing the likelihood of producing heritable trait(s) that might be beneficial to that population in combating those adverse survival conditions in that environment?
In bacteria this is known as "Stress Induced Mutagensis"
Is there something comparable to that in animals and plants?
evolution mutations sexual-reproduction
$endgroup$
Can stress that is related to a threat of survival of a population of animals or plants in some environment, like due to hunger, thirst, fear from predators, etc..; results in an increase in average mutation rate in germline cells of individuals of that population, thereby increasing the likelihood of producing heritable trait(s) that might be beneficial to that population in combating those adverse survival conditions in that environment?
In bacteria this is known as "Stress Induced Mutagensis"
Is there something comparable to that in animals and plants?
evolution mutations sexual-reproduction
evolution mutations sexual-reproduction
edited Mar 29 at 12:29
Zuhair Al-Johar
asked Mar 29 at 9:05
Zuhair Al-JoharZuhair Al-Johar
2369
2369
add a comment |
add a comment |
1 Answer
1
active
oldest
votes
$begingroup$
Well... since I can't delete this accepted answer... it's going to be a reverse ferret, to some extent. One 2014 review by Ram and Hadany lists a fair number of SIM occurrences outside of bacteria:
Stress-induced mutagenesis (SIM)—the increase of mutation rates in stressed or maladapted individuals—has been demonstrated in several species, including both prokaryotes and eukaryotes. [...] SIM has also been observed in yeast, algae, nematodes, flies and human cancer cells.
The one for algae (Goho and Bell, 2000) appears/claims to have been the fist:
Cultures of Chlamydomonas were exposed to a range of relatively mild stresses for a period of 24 h. These stresses comprised high and low temperatures, osmotic stress, low pH, starvation and toxic stress. Fitness was then assayed as the rate of division of isolated cells on agar. We found that there was a strong tendency for stressed cultures to have lower mean fitness and greater standardized variance in fitness than the negative controls which had been cultured throughout in unmodified minimal medium. The same tendency was shown, as expected, by positive controls which received mutagenic doses of ultraviolet irradiation. We concluded that the most reasonable interpretation of these observations is that mild stress increases the genomic rate of mutation. This appears to be the first time that this phenomenon has been noticed in eukaryotes.
The paper cited for Drosophila, Sharp and Agrawal (2012)
Our results show that mutation rates are sensitive to genetic stress, such that individuals with low-quality genotypes will produce offspring of even lower genetic quality, in a mutational positive feedback loop. This type of variation in mutation rate is expected to alter a variety of predictions based on mutation load theory and accelerate adaptation to new environments. Positive mutational feedback could affect human health by increasing the rate of germline mutation, and possibly somatic mutation, in individuals of poor health because of genetic or environmental stress.
Clearly this one is quite bold in extrapolating its findings.
And long story short, the paper on nematodes (Matsuba et al., 2012) finds a temperature dependant mutation rate.
What seems to be the weak point in these paper, and perhaps why a more critical review of Lynch et al., 2016 of SIM doesn't mention them, is that no explicit mediating mechanism appear to have been identified in these studies on eukaryotes. In bacteria (e.g. the paper linked by the OP) how SIM works inside the cell is pretty well understood, there are in fact several mechanisms that all respond (convergently) to various forms of stress.
There's an acknowledgement (in the Drosophila) paper, that such mechanisms in eukaryotes might differ from bacteria
The sources and mechanisms underlying this variation have been best studied in microbes, but the sources of variation in microbes may differ from those in multicellular eukaryotes for several reasons. [...]
In animals, mutation rate varies among genotypes, although the functional sources of this variation are unknown. [...]
It does go on into some theories how it might work.
As for yeast, Rodriguez et al. (2012)
Mismatch repair (MMR) is a major DNA repair pathway in cells from all branches of life that removes replication errors in a strand-specific manner, such that mismatched nucleotides are preferentially removed from the newly replicated strand of DNA. Here we demonstrate a role for MMR in helping create new phenotypes in nondividing cells. We show that mispairs in yeast that escape MMR during replication can later be subject to MMR activity in a replication strand-independent manner in nondividing cells, resulting in either fully wild-type or mutant DNA sequence. In one case, this activity is responsible for what appears to be adaptive mutation. This replication strand-independent MMR activity could contribute to the formation of tumors arising in nondividing cells and could also contribute to mutagenesis observed during somatic hypermutation of Ig genes.
I guess a weak point of this paper vis-a-vis of SIM (which they only mention in passing) is that it's not obvious in their setup what the stress was. Basically they saw (adaptive) mutation-rate change (in response to the environment), but they don't pinpoint what exactly they think the stressor was. So this paper is a way the reverse of the other three I, i.e. the mechanism is clear, but stress is not.
$endgroup$
$begingroup$
but in humans stress has been identified with abnormal sperm morphology, so this might be related to an increment in mutation rate in the male germline cells which would most likely have a bad side to it, which we happen to observe, since most mutations are deleterious. But that might not be the complete story, there may be a possibility of a beneficial aspect that escaped observation, i.e. a beneficial mutation that might arise from the possibly higher rate of mutation.
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
see: medicalnewstoday.com/articles/277543.php
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
@ZuhairAl-Johar: (psychological) stress at the level of organism doesn't necessarily translate in the kind of cell-level stress needed to produce [more] mutagenesis. At least I don't know of evidence for that link. The article you indicated talks about lower testosterone etc. as the effect of organism-level stress; it's not clear that that has any effect on mutagenesis, and I think it probably doesn't have such an effect.
$endgroup$
– Fizz
Mar 29 at 13:52
$begingroup$
I don't have access to the review, but are you sure it supports such a broad claim? For instance, we've known for several years that Alu translocation rate is increased in response to heat stress. I am not entirely sure if the OP would include this sort of stress, but still.
$endgroup$
– terdon
Mar 29 at 14:33
1
$begingroup$
@ZuhairAl-Johar What do you mean by heat stress? The feeling that your surrounding is too hot? Or the gametes being exposed to high temperatures? Because in your examples you describe stress as more psychological state of mind (ex. fear), but in these it's the latter i.e. I believe the cell upregulates or loses regulation of DNA mutation processes in direct response to heat.
$endgroup$
– Cell
Mar 29 at 17:08
|
show 8 more comments
Your Answer
StackExchange.ready(function()
var channelOptions =
tags: "".split(" "),
id: "375"
;
initTagRenderer("".split(" "), "".split(" "), channelOptions);
StackExchange.using("externalEditor", function()
// Have to fire editor after snippets, if snippets enabled
if (StackExchange.settings.snippets.snippetsEnabled)
StackExchange.using("snippets", function()
createEditor();
);
else
createEditor();
);
function createEditor()
StackExchange.prepareEditor(
heartbeatType: 'answer',
autoActivateHeartbeat: false,
convertImagesToLinks: false,
noModals: true,
showLowRepImageUploadWarning: true,
reputationToPostImages: null,
bindNavPrevention: true,
postfix: "",
imageUploader:
brandingHtml: "Powered by u003ca class="icon-imgur-white" href="https://imgur.com/"u003eu003c/au003e",
contentPolicyHtml: "User contributions licensed under u003ca href="https://creativecommons.org/licenses/by-sa/3.0/"u003ecc by-sa 3.0 with attribution requiredu003c/au003e u003ca href="https://stackoverflow.com/legal/content-policy"u003e(content policy)u003c/au003e",
allowUrls: true
,
noCode: true, onDemand: true,
discardSelector: ".discard-answer"
,immediatelyShowMarkdownHelp:true
);
);
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function ()
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fbiology.stackexchange.com%2fquestions%2f82346%2fcan-threat-to-survival-increase-mutation-rates-in-germline-cells%23new-answer', 'question_page');
);
Post as a guest
Required, but never shown
1 Answer
1
active
oldest
votes
1 Answer
1
active
oldest
votes
active
oldest
votes
active
oldest
votes
$begingroup$
Well... since I can't delete this accepted answer... it's going to be a reverse ferret, to some extent. One 2014 review by Ram and Hadany lists a fair number of SIM occurrences outside of bacteria:
Stress-induced mutagenesis (SIM)—the increase of mutation rates in stressed or maladapted individuals—has been demonstrated in several species, including both prokaryotes and eukaryotes. [...] SIM has also been observed in yeast, algae, nematodes, flies and human cancer cells.
The one for algae (Goho and Bell, 2000) appears/claims to have been the fist:
Cultures of Chlamydomonas were exposed to a range of relatively mild stresses for a period of 24 h. These stresses comprised high and low temperatures, osmotic stress, low pH, starvation and toxic stress. Fitness was then assayed as the rate of division of isolated cells on agar. We found that there was a strong tendency for stressed cultures to have lower mean fitness and greater standardized variance in fitness than the negative controls which had been cultured throughout in unmodified minimal medium. The same tendency was shown, as expected, by positive controls which received mutagenic doses of ultraviolet irradiation. We concluded that the most reasonable interpretation of these observations is that mild stress increases the genomic rate of mutation. This appears to be the first time that this phenomenon has been noticed in eukaryotes.
The paper cited for Drosophila, Sharp and Agrawal (2012)
Our results show that mutation rates are sensitive to genetic stress, such that individuals with low-quality genotypes will produce offspring of even lower genetic quality, in a mutational positive feedback loop. This type of variation in mutation rate is expected to alter a variety of predictions based on mutation load theory and accelerate adaptation to new environments. Positive mutational feedback could affect human health by increasing the rate of germline mutation, and possibly somatic mutation, in individuals of poor health because of genetic or environmental stress.
Clearly this one is quite bold in extrapolating its findings.
And long story short, the paper on nematodes (Matsuba et al., 2012) finds a temperature dependant mutation rate.
What seems to be the weak point in these paper, and perhaps why a more critical review of Lynch et al., 2016 of SIM doesn't mention them, is that no explicit mediating mechanism appear to have been identified in these studies on eukaryotes. In bacteria (e.g. the paper linked by the OP) how SIM works inside the cell is pretty well understood, there are in fact several mechanisms that all respond (convergently) to various forms of stress.
There's an acknowledgement (in the Drosophila) paper, that such mechanisms in eukaryotes might differ from bacteria
The sources and mechanisms underlying this variation have been best studied in microbes, but the sources of variation in microbes may differ from those in multicellular eukaryotes for several reasons. [...]
In animals, mutation rate varies among genotypes, although the functional sources of this variation are unknown. [...]
It does go on into some theories how it might work.
As for yeast, Rodriguez et al. (2012)
Mismatch repair (MMR) is a major DNA repair pathway in cells from all branches of life that removes replication errors in a strand-specific manner, such that mismatched nucleotides are preferentially removed from the newly replicated strand of DNA. Here we demonstrate a role for MMR in helping create new phenotypes in nondividing cells. We show that mispairs in yeast that escape MMR during replication can later be subject to MMR activity in a replication strand-independent manner in nondividing cells, resulting in either fully wild-type or mutant DNA sequence. In one case, this activity is responsible for what appears to be adaptive mutation. This replication strand-independent MMR activity could contribute to the formation of tumors arising in nondividing cells and could also contribute to mutagenesis observed during somatic hypermutation of Ig genes.
I guess a weak point of this paper vis-a-vis of SIM (which they only mention in passing) is that it's not obvious in their setup what the stress was. Basically they saw (adaptive) mutation-rate change (in response to the environment), but they don't pinpoint what exactly they think the stressor was. So this paper is a way the reverse of the other three I, i.e. the mechanism is clear, but stress is not.
$endgroup$
$begingroup$
but in humans stress has been identified with abnormal sperm morphology, so this might be related to an increment in mutation rate in the male germline cells which would most likely have a bad side to it, which we happen to observe, since most mutations are deleterious. But that might not be the complete story, there may be a possibility of a beneficial aspect that escaped observation, i.e. a beneficial mutation that might arise from the possibly higher rate of mutation.
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
see: medicalnewstoday.com/articles/277543.php
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
@ZuhairAl-Johar: (psychological) stress at the level of organism doesn't necessarily translate in the kind of cell-level stress needed to produce [more] mutagenesis. At least I don't know of evidence for that link. The article you indicated talks about lower testosterone etc. as the effect of organism-level stress; it's not clear that that has any effect on mutagenesis, and I think it probably doesn't have such an effect.
$endgroup$
– Fizz
Mar 29 at 13:52
$begingroup$
I don't have access to the review, but are you sure it supports such a broad claim? For instance, we've known for several years that Alu translocation rate is increased in response to heat stress. I am not entirely sure if the OP would include this sort of stress, but still.
$endgroup$
– terdon
Mar 29 at 14:33
1
$begingroup$
@ZuhairAl-Johar What do you mean by heat stress? The feeling that your surrounding is too hot? Or the gametes being exposed to high temperatures? Because in your examples you describe stress as more psychological state of mind (ex. fear), but in these it's the latter i.e. I believe the cell upregulates or loses regulation of DNA mutation processes in direct response to heat.
$endgroup$
– Cell
Mar 29 at 17:08
|
show 8 more comments
$begingroup$
Well... since I can't delete this accepted answer... it's going to be a reverse ferret, to some extent. One 2014 review by Ram and Hadany lists a fair number of SIM occurrences outside of bacteria:
Stress-induced mutagenesis (SIM)—the increase of mutation rates in stressed or maladapted individuals—has been demonstrated in several species, including both prokaryotes and eukaryotes. [...] SIM has also been observed in yeast, algae, nematodes, flies and human cancer cells.
The one for algae (Goho and Bell, 2000) appears/claims to have been the fist:
Cultures of Chlamydomonas were exposed to a range of relatively mild stresses for a period of 24 h. These stresses comprised high and low temperatures, osmotic stress, low pH, starvation and toxic stress. Fitness was then assayed as the rate of division of isolated cells on agar. We found that there was a strong tendency for stressed cultures to have lower mean fitness and greater standardized variance in fitness than the negative controls which had been cultured throughout in unmodified minimal medium. The same tendency was shown, as expected, by positive controls which received mutagenic doses of ultraviolet irradiation. We concluded that the most reasonable interpretation of these observations is that mild stress increases the genomic rate of mutation. This appears to be the first time that this phenomenon has been noticed in eukaryotes.
The paper cited for Drosophila, Sharp and Agrawal (2012)
Our results show that mutation rates are sensitive to genetic stress, such that individuals with low-quality genotypes will produce offspring of even lower genetic quality, in a mutational positive feedback loop. This type of variation in mutation rate is expected to alter a variety of predictions based on mutation load theory and accelerate adaptation to new environments. Positive mutational feedback could affect human health by increasing the rate of germline mutation, and possibly somatic mutation, in individuals of poor health because of genetic or environmental stress.
Clearly this one is quite bold in extrapolating its findings.
And long story short, the paper on nematodes (Matsuba et al., 2012) finds a temperature dependant mutation rate.
What seems to be the weak point in these paper, and perhaps why a more critical review of Lynch et al., 2016 of SIM doesn't mention them, is that no explicit mediating mechanism appear to have been identified in these studies on eukaryotes. In bacteria (e.g. the paper linked by the OP) how SIM works inside the cell is pretty well understood, there are in fact several mechanisms that all respond (convergently) to various forms of stress.
There's an acknowledgement (in the Drosophila) paper, that such mechanisms in eukaryotes might differ from bacteria
The sources and mechanisms underlying this variation have been best studied in microbes, but the sources of variation in microbes may differ from those in multicellular eukaryotes for several reasons. [...]
In animals, mutation rate varies among genotypes, although the functional sources of this variation are unknown. [...]
It does go on into some theories how it might work.
As for yeast, Rodriguez et al. (2012)
Mismatch repair (MMR) is a major DNA repair pathway in cells from all branches of life that removes replication errors in a strand-specific manner, such that mismatched nucleotides are preferentially removed from the newly replicated strand of DNA. Here we demonstrate a role for MMR in helping create new phenotypes in nondividing cells. We show that mispairs in yeast that escape MMR during replication can later be subject to MMR activity in a replication strand-independent manner in nondividing cells, resulting in either fully wild-type or mutant DNA sequence. In one case, this activity is responsible for what appears to be adaptive mutation. This replication strand-independent MMR activity could contribute to the formation of tumors arising in nondividing cells and could also contribute to mutagenesis observed during somatic hypermutation of Ig genes.
I guess a weak point of this paper vis-a-vis of SIM (which they only mention in passing) is that it's not obvious in their setup what the stress was. Basically they saw (adaptive) mutation-rate change (in response to the environment), but they don't pinpoint what exactly they think the stressor was. So this paper is a way the reverse of the other three I, i.e. the mechanism is clear, but stress is not.
$endgroup$
$begingroup$
but in humans stress has been identified with abnormal sperm morphology, so this might be related to an increment in mutation rate in the male germline cells which would most likely have a bad side to it, which we happen to observe, since most mutations are deleterious. But that might not be the complete story, there may be a possibility of a beneficial aspect that escaped observation, i.e. a beneficial mutation that might arise from the possibly higher rate of mutation.
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
see: medicalnewstoday.com/articles/277543.php
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
@ZuhairAl-Johar: (psychological) stress at the level of organism doesn't necessarily translate in the kind of cell-level stress needed to produce [more] mutagenesis. At least I don't know of evidence for that link. The article you indicated talks about lower testosterone etc. as the effect of organism-level stress; it's not clear that that has any effect on mutagenesis, and I think it probably doesn't have such an effect.
$endgroup$
– Fizz
Mar 29 at 13:52
$begingroup$
I don't have access to the review, but are you sure it supports such a broad claim? For instance, we've known for several years that Alu translocation rate is increased in response to heat stress. I am not entirely sure if the OP would include this sort of stress, but still.
$endgroup$
– terdon
Mar 29 at 14:33
1
$begingroup$
@ZuhairAl-Johar What do you mean by heat stress? The feeling that your surrounding is too hot? Or the gametes being exposed to high temperatures? Because in your examples you describe stress as more psychological state of mind (ex. fear), but in these it's the latter i.e. I believe the cell upregulates or loses regulation of DNA mutation processes in direct response to heat.
$endgroup$
– Cell
Mar 29 at 17:08
|
show 8 more comments
$begingroup$
Well... since I can't delete this accepted answer... it's going to be a reverse ferret, to some extent. One 2014 review by Ram and Hadany lists a fair number of SIM occurrences outside of bacteria:
Stress-induced mutagenesis (SIM)—the increase of mutation rates in stressed or maladapted individuals—has been demonstrated in several species, including both prokaryotes and eukaryotes. [...] SIM has also been observed in yeast, algae, nematodes, flies and human cancer cells.
The one for algae (Goho and Bell, 2000) appears/claims to have been the fist:
Cultures of Chlamydomonas were exposed to a range of relatively mild stresses for a period of 24 h. These stresses comprised high and low temperatures, osmotic stress, low pH, starvation and toxic stress. Fitness was then assayed as the rate of division of isolated cells on agar. We found that there was a strong tendency for stressed cultures to have lower mean fitness and greater standardized variance in fitness than the negative controls which had been cultured throughout in unmodified minimal medium. The same tendency was shown, as expected, by positive controls which received mutagenic doses of ultraviolet irradiation. We concluded that the most reasonable interpretation of these observations is that mild stress increases the genomic rate of mutation. This appears to be the first time that this phenomenon has been noticed in eukaryotes.
The paper cited for Drosophila, Sharp and Agrawal (2012)
Our results show that mutation rates are sensitive to genetic stress, such that individuals with low-quality genotypes will produce offspring of even lower genetic quality, in a mutational positive feedback loop. This type of variation in mutation rate is expected to alter a variety of predictions based on mutation load theory and accelerate adaptation to new environments. Positive mutational feedback could affect human health by increasing the rate of germline mutation, and possibly somatic mutation, in individuals of poor health because of genetic or environmental stress.
Clearly this one is quite bold in extrapolating its findings.
And long story short, the paper on nematodes (Matsuba et al., 2012) finds a temperature dependant mutation rate.
What seems to be the weak point in these paper, and perhaps why a more critical review of Lynch et al., 2016 of SIM doesn't mention them, is that no explicit mediating mechanism appear to have been identified in these studies on eukaryotes. In bacteria (e.g. the paper linked by the OP) how SIM works inside the cell is pretty well understood, there are in fact several mechanisms that all respond (convergently) to various forms of stress.
There's an acknowledgement (in the Drosophila) paper, that such mechanisms in eukaryotes might differ from bacteria
The sources and mechanisms underlying this variation have been best studied in microbes, but the sources of variation in microbes may differ from those in multicellular eukaryotes for several reasons. [...]
In animals, mutation rate varies among genotypes, although the functional sources of this variation are unknown. [...]
It does go on into some theories how it might work.
As for yeast, Rodriguez et al. (2012)
Mismatch repair (MMR) is a major DNA repair pathway in cells from all branches of life that removes replication errors in a strand-specific manner, such that mismatched nucleotides are preferentially removed from the newly replicated strand of DNA. Here we demonstrate a role for MMR in helping create new phenotypes in nondividing cells. We show that mispairs in yeast that escape MMR during replication can later be subject to MMR activity in a replication strand-independent manner in nondividing cells, resulting in either fully wild-type or mutant DNA sequence. In one case, this activity is responsible for what appears to be adaptive mutation. This replication strand-independent MMR activity could contribute to the formation of tumors arising in nondividing cells and could also contribute to mutagenesis observed during somatic hypermutation of Ig genes.
I guess a weak point of this paper vis-a-vis of SIM (which they only mention in passing) is that it's not obvious in their setup what the stress was. Basically they saw (adaptive) mutation-rate change (in response to the environment), but they don't pinpoint what exactly they think the stressor was. So this paper is a way the reverse of the other three I, i.e. the mechanism is clear, but stress is not.
$endgroup$
Well... since I can't delete this accepted answer... it's going to be a reverse ferret, to some extent. One 2014 review by Ram and Hadany lists a fair number of SIM occurrences outside of bacteria:
Stress-induced mutagenesis (SIM)—the increase of mutation rates in stressed or maladapted individuals—has been demonstrated in several species, including both prokaryotes and eukaryotes. [...] SIM has also been observed in yeast, algae, nematodes, flies and human cancer cells.
The one for algae (Goho and Bell, 2000) appears/claims to have been the fist:
Cultures of Chlamydomonas were exposed to a range of relatively mild stresses for a period of 24 h. These stresses comprised high and low temperatures, osmotic stress, low pH, starvation and toxic stress. Fitness was then assayed as the rate of division of isolated cells on agar. We found that there was a strong tendency for stressed cultures to have lower mean fitness and greater standardized variance in fitness than the negative controls which had been cultured throughout in unmodified minimal medium. The same tendency was shown, as expected, by positive controls which received mutagenic doses of ultraviolet irradiation. We concluded that the most reasonable interpretation of these observations is that mild stress increases the genomic rate of mutation. This appears to be the first time that this phenomenon has been noticed in eukaryotes.
The paper cited for Drosophila, Sharp and Agrawal (2012)
Our results show that mutation rates are sensitive to genetic stress, such that individuals with low-quality genotypes will produce offspring of even lower genetic quality, in a mutational positive feedback loop. This type of variation in mutation rate is expected to alter a variety of predictions based on mutation load theory and accelerate adaptation to new environments. Positive mutational feedback could affect human health by increasing the rate of germline mutation, and possibly somatic mutation, in individuals of poor health because of genetic or environmental stress.
Clearly this one is quite bold in extrapolating its findings.
And long story short, the paper on nematodes (Matsuba et al., 2012) finds a temperature dependant mutation rate.
What seems to be the weak point in these paper, and perhaps why a more critical review of Lynch et al., 2016 of SIM doesn't mention them, is that no explicit mediating mechanism appear to have been identified in these studies on eukaryotes. In bacteria (e.g. the paper linked by the OP) how SIM works inside the cell is pretty well understood, there are in fact several mechanisms that all respond (convergently) to various forms of stress.
There's an acknowledgement (in the Drosophila) paper, that such mechanisms in eukaryotes might differ from bacteria
The sources and mechanisms underlying this variation have been best studied in microbes, but the sources of variation in microbes may differ from those in multicellular eukaryotes for several reasons. [...]
In animals, mutation rate varies among genotypes, although the functional sources of this variation are unknown. [...]
It does go on into some theories how it might work.
As for yeast, Rodriguez et al. (2012)
Mismatch repair (MMR) is a major DNA repair pathway in cells from all branches of life that removes replication errors in a strand-specific manner, such that mismatched nucleotides are preferentially removed from the newly replicated strand of DNA. Here we demonstrate a role for MMR in helping create new phenotypes in nondividing cells. We show that mispairs in yeast that escape MMR during replication can later be subject to MMR activity in a replication strand-independent manner in nondividing cells, resulting in either fully wild-type or mutant DNA sequence. In one case, this activity is responsible for what appears to be adaptive mutation. This replication strand-independent MMR activity could contribute to the formation of tumors arising in nondividing cells and could also contribute to mutagenesis observed during somatic hypermutation of Ig genes.
I guess a weak point of this paper vis-a-vis of SIM (which they only mention in passing) is that it's not obvious in their setup what the stress was. Basically they saw (adaptive) mutation-rate change (in response to the environment), but they don't pinpoint what exactly they think the stressor was. So this paper is a way the reverse of the other three I, i.e. the mechanism is clear, but stress is not.
edited Mar 29 at 16:02
answered Mar 29 at 10:27
FizzFizz
1,064316
1,064316
$begingroup$
but in humans stress has been identified with abnormal sperm morphology, so this might be related to an increment in mutation rate in the male germline cells which would most likely have a bad side to it, which we happen to observe, since most mutations are deleterious. But that might not be the complete story, there may be a possibility of a beneficial aspect that escaped observation, i.e. a beneficial mutation that might arise from the possibly higher rate of mutation.
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
see: medicalnewstoday.com/articles/277543.php
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
@ZuhairAl-Johar: (psychological) stress at the level of organism doesn't necessarily translate in the kind of cell-level stress needed to produce [more] mutagenesis. At least I don't know of evidence for that link. The article you indicated talks about lower testosterone etc. as the effect of organism-level stress; it's not clear that that has any effect on mutagenesis, and I think it probably doesn't have such an effect.
$endgroup$
– Fizz
Mar 29 at 13:52
$begingroup$
I don't have access to the review, but are you sure it supports such a broad claim? For instance, we've known for several years that Alu translocation rate is increased in response to heat stress. I am not entirely sure if the OP would include this sort of stress, but still.
$endgroup$
– terdon
Mar 29 at 14:33
1
$begingroup$
@ZuhairAl-Johar What do you mean by heat stress? The feeling that your surrounding is too hot? Or the gametes being exposed to high temperatures? Because in your examples you describe stress as more psychological state of mind (ex. fear), but in these it's the latter i.e. I believe the cell upregulates or loses regulation of DNA mutation processes in direct response to heat.
$endgroup$
– Cell
Mar 29 at 17:08
|
show 8 more comments
$begingroup$
but in humans stress has been identified with abnormal sperm morphology, so this might be related to an increment in mutation rate in the male germline cells which would most likely have a bad side to it, which we happen to observe, since most mutations are deleterious. But that might not be the complete story, there may be a possibility of a beneficial aspect that escaped observation, i.e. a beneficial mutation that might arise from the possibly higher rate of mutation.
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
see: medicalnewstoday.com/articles/277543.php
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
@ZuhairAl-Johar: (psychological) stress at the level of organism doesn't necessarily translate in the kind of cell-level stress needed to produce [more] mutagenesis. At least I don't know of evidence for that link. The article you indicated talks about lower testosterone etc. as the effect of organism-level stress; it's not clear that that has any effect on mutagenesis, and I think it probably doesn't have such an effect.
$endgroup$
– Fizz
Mar 29 at 13:52
$begingroup$
I don't have access to the review, but are you sure it supports such a broad claim? For instance, we've known for several years that Alu translocation rate is increased in response to heat stress. I am not entirely sure if the OP would include this sort of stress, but still.
$endgroup$
– terdon
Mar 29 at 14:33
1
$begingroup$
@ZuhairAl-Johar What do you mean by heat stress? The feeling that your surrounding is too hot? Or the gametes being exposed to high temperatures? Because in your examples you describe stress as more psychological state of mind (ex. fear), but in these it's the latter i.e. I believe the cell upregulates or loses regulation of DNA mutation processes in direct response to heat.
$endgroup$
– Cell
Mar 29 at 17:08
$begingroup$
but in humans stress has been identified with abnormal sperm morphology, so this might be related to an increment in mutation rate in the male germline cells which would most likely have a bad side to it, which we happen to observe, since most mutations are deleterious. But that might not be the complete story, there may be a possibility of a beneficial aspect that escaped observation, i.e. a beneficial mutation that might arise from the possibly higher rate of mutation.
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
but in humans stress has been identified with abnormal sperm morphology, so this might be related to an increment in mutation rate in the male germline cells which would most likely have a bad side to it, which we happen to observe, since most mutations are deleterious. But that might not be the complete story, there may be a possibility of a beneficial aspect that escaped observation, i.e. a beneficial mutation that might arise from the possibly higher rate of mutation.
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
see: medicalnewstoday.com/articles/277543.php
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
see: medicalnewstoday.com/articles/277543.php
$endgroup$
– Zuhair Al-Johar
Mar 29 at 13:43
$begingroup$
@ZuhairAl-Johar: (psychological) stress at the level of organism doesn't necessarily translate in the kind of cell-level stress needed to produce [more] mutagenesis. At least I don't know of evidence for that link. The article you indicated talks about lower testosterone etc. as the effect of organism-level stress; it's not clear that that has any effect on mutagenesis, and I think it probably doesn't have such an effect.
$endgroup$
– Fizz
Mar 29 at 13:52
$begingroup$
@ZuhairAl-Johar: (psychological) stress at the level of organism doesn't necessarily translate in the kind of cell-level stress needed to produce [more] mutagenesis. At least I don't know of evidence for that link. The article you indicated talks about lower testosterone etc. as the effect of organism-level stress; it's not clear that that has any effect on mutagenesis, and I think it probably doesn't have such an effect.
$endgroup$
– Fizz
Mar 29 at 13:52
$begingroup$
I don't have access to the review, but are you sure it supports such a broad claim? For instance, we've known for several years that Alu translocation rate is increased in response to heat stress. I am not entirely sure if the OP would include this sort of stress, but still.
$endgroup$
– terdon
Mar 29 at 14:33
$begingroup$
I don't have access to the review, but are you sure it supports such a broad claim? For instance, we've known for several years that Alu translocation rate is increased in response to heat stress. I am not entirely sure if the OP would include this sort of stress, but still.
$endgroup$
– terdon
Mar 29 at 14:33
1
1
$begingroup$
@ZuhairAl-Johar What do you mean by heat stress? The feeling that your surrounding is too hot? Or the gametes being exposed to high temperatures? Because in your examples you describe stress as more psychological state of mind (ex. fear), but in these it's the latter i.e. I believe the cell upregulates or loses regulation of DNA mutation processes in direct response to heat.
$endgroup$
– Cell
Mar 29 at 17:08
$begingroup$
@ZuhairAl-Johar What do you mean by heat stress? The feeling that your surrounding is too hot? Or the gametes being exposed to high temperatures? Because in your examples you describe stress as more psychological state of mind (ex. fear), but in these it's the latter i.e. I believe the cell upregulates or loses regulation of DNA mutation processes in direct response to heat.
$endgroup$
– Cell
Mar 29 at 17:08
|
show 8 more comments
Thanks for contributing an answer to Biology Stack Exchange!
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
Use MathJax to format equations. MathJax reference.
To learn more, see our tips on writing great answers.
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function ()
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fbiology.stackexchange.com%2fquestions%2f82346%2fcan-threat-to-survival-increase-mutation-rates-in-germline-cells%23new-answer', 'question_page');
);
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown