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Using ClipPlanes with AnatomyData



Planned maintenance scheduled April 23, 2019 at 00:00UTC (8:00pm US/Eastern)
Announcing the arrival of Valued Associate #679: Cesar Manara
Unicorn Meta Zoo #1: Why another podcast?Functions, Options and SymbolsFind elements in a decay chain using IsotopeDataComputing lists using AstronomicalDataUsing DeleteCases with multiple AstronomicalData propertiesUtility information using FindGeoLocation in Ver.10Plot “OilReserves” using CountryData from 1985 until 2014SpaceFillingMolecularPlot using CAS number of a compoundUsing GraphData to generate all directed graphs with n verticesMissing elements using FinancialDataDifficulties using AdministrativeDivisionData and Entities: Who cures the curator?Dealing with cache file locks when using EntityValue in ParallelMap










4












$begingroup$


Suppose I render a simple eyeball:



AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]]


Anatomy plot of eyeball



but want to cut it in half using ClipPlanes, for instance to eliminate the left half of the eyeball.



By what principled method do I know how to specify the plane? I tried the obvious



ClipPlanes -> 1,0,0,0


and



0,0,0,0,1,0,0,0,1


without success.










share|improve this question











$endgroup$
















    4












    $begingroup$


    Suppose I render a simple eyeball:



    AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]]


    Anatomy plot of eyeball



    but want to cut it in half using ClipPlanes, for instance to eliminate the left half of the eyeball.



    By what principled method do I know how to specify the plane? I tried the obvious



    ClipPlanes -> 1,0,0,0


    and



    0,0,0,0,1,0,0,0,1


    without success.










    share|improve this question











    $endgroup$














      4












      4








      4


      2



      $begingroup$


      Suppose I render a simple eyeball:



      AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]]


      Anatomy plot of eyeball



      but want to cut it in half using ClipPlanes, for instance to eliminate the left half of the eyeball.



      By what principled method do I know how to specify the plane? I tried the obvious



      ClipPlanes -> 1,0,0,0


      and



      0,0,0,0,1,0,0,0,1


      without success.










      share|improve this question











      $endgroup$




      Suppose I render a simple eyeball:



      AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]]


      Anatomy plot of eyeball



      but want to cut it in half using ClipPlanes, for instance to eliminate the left half of the eyeball.



      By what principled method do I know how to specify the plane? I tried the obvious



      ClipPlanes -> 1,0,0,0


      and



      0,0,0,0,1,0,0,0,1


      without success.







      curated-data anatomy






      share|improve this question















      share|improve this question













      share|improve this question




      share|improve this question








      edited Mar 23 at 6:54









      J. M. is away

      98.9k10311468




      98.9k10311468










      asked Mar 23 at 6:52









      David G. StorkDavid G. Stork

      24.9k22155




      24.9k22155




















          1 Answer
          1






          active

          oldest

          votes


















          4












          $begingroup$

          Of course ClipPlanes works here. The problem is that you had mistakenly assumed the PlotRange:



          eyeball = AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]];

          pr = PlotRange[eyeball]
          -43.6181, -17.298, -166.051, -138.829, 1504.96, 1531.19


          Thus,



          Show[eyeball, 
          ClipPlanes -> InfinitePlane[Mean[Transpose[pr]], 1, -1 IdentityMatrix[3][[2, 3]]]]


          eyeball cross-section






          share|improve this answer











          $endgroup$












          • $begingroup$
            I didn't know how to get the PlotRange of the object. Simple! Thanks so much. (Accept)
            $endgroup$
            – David G. Stork
            Mar 23 at 7:32










          • $begingroup$
            Another way of finding the center of the eyeball is with EntityValue[eyeball, "EnclosingSphere"][[1]].
            $endgroup$
            – Roman
            Mar 23 at 12:55










          • $begingroup$
            @J.M. Do you know of a place where this functionality of PlotRange is documented?
            $endgroup$
            – Lukas Lang
            Mar 23 at 13:04










          • $begingroup$
            @Lukas, I do not believe it is documented, but it's been around for a long while.
            $endgroup$
            – J. M. is away
            Mar 23 at 13:07











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          1 Answer
          1






          active

          oldest

          votes








          1 Answer
          1






          active

          oldest

          votes









          active

          oldest

          votes






          active

          oldest

          votes









          4












          $begingroup$

          Of course ClipPlanes works here. The problem is that you had mistakenly assumed the PlotRange:



          eyeball = AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]];

          pr = PlotRange[eyeball]
          -43.6181, -17.298, -166.051, -138.829, 1504.96, 1531.19


          Thus,



          Show[eyeball, 
          ClipPlanes -> InfinitePlane[Mean[Transpose[pr]], 1, -1 IdentityMatrix[3][[2, 3]]]]


          eyeball cross-section






          share|improve this answer











          $endgroup$












          • $begingroup$
            I didn't know how to get the PlotRange of the object. Simple! Thanks so much. (Accept)
            $endgroup$
            – David G. Stork
            Mar 23 at 7:32










          • $begingroup$
            Another way of finding the center of the eyeball is with EntityValue[eyeball, "EnclosingSphere"][[1]].
            $endgroup$
            – Roman
            Mar 23 at 12:55










          • $begingroup$
            @J.M. Do you know of a place where this functionality of PlotRange is documented?
            $endgroup$
            – Lukas Lang
            Mar 23 at 13:04










          • $begingroup$
            @Lukas, I do not believe it is documented, but it's been around for a long while.
            $endgroup$
            – J. M. is away
            Mar 23 at 13:07















          4












          $begingroup$

          Of course ClipPlanes works here. The problem is that you had mistakenly assumed the PlotRange:



          eyeball = AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]];

          pr = PlotRange[eyeball]
          -43.6181, -17.298, -166.051, -138.829, 1504.96, 1531.19


          Thus,



          Show[eyeball, 
          ClipPlanes -> InfinitePlane[Mean[Transpose[pr]], 1, -1 IdentityMatrix[3][[2, 3]]]]


          eyeball cross-section






          share|improve this answer











          $endgroup$












          • $begingroup$
            I didn't know how to get the PlotRange of the object. Simple! Thanks so much. (Accept)
            $endgroup$
            – David G. Stork
            Mar 23 at 7:32










          • $begingroup$
            Another way of finding the center of the eyeball is with EntityValue[eyeball, "EnclosingSphere"][[1]].
            $endgroup$
            – Roman
            Mar 23 at 12:55










          • $begingroup$
            @J.M. Do you know of a place where this functionality of PlotRange is documented?
            $endgroup$
            – Lukas Lang
            Mar 23 at 13:04










          • $begingroup$
            @Lukas, I do not believe it is documented, but it's been around for a long while.
            $endgroup$
            – J. M. is away
            Mar 23 at 13:07













          4












          4








          4





          $begingroup$

          Of course ClipPlanes works here. The problem is that you had mistakenly assumed the PlotRange:



          eyeball = AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]];

          pr = PlotRange[eyeball]
          -43.6181, -17.298, -166.051, -138.829, 1504.96, 1531.19


          Thus,



          Show[eyeball, 
          ClipPlanes -> InfinitePlane[Mean[Transpose[pr]], 1, -1 IdentityMatrix[3][[2, 3]]]]


          eyeball cross-section






          share|improve this answer











          $endgroup$



          Of course ClipPlanes works here. The problem is that you had mistakenly assumed the PlotRange:



          eyeball = AnatomyPlot3D[Entity["AnatomicalStructure", "RightEyeball"]];

          pr = PlotRange[eyeball]
          -43.6181, -17.298, -166.051, -138.829, 1504.96, 1531.19


          Thus,



          Show[eyeball, 
          ClipPlanes -> InfinitePlane[Mean[Transpose[pr]], 1, -1 IdentityMatrix[3][[2, 3]]]]


          eyeball cross-section







          share|improve this answer














          share|improve this answer



          share|improve this answer








          answered Mar 23 at 7:06


























          community wiki





          J. M. is away












          • $begingroup$
            I didn't know how to get the PlotRange of the object. Simple! Thanks so much. (Accept)
            $endgroup$
            – David G. Stork
            Mar 23 at 7:32










          • $begingroup$
            Another way of finding the center of the eyeball is with EntityValue[eyeball, "EnclosingSphere"][[1]].
            $endgroup$
            – Roman
            Mar 23 at 12:55










          • $begingroup$
            @J.M. Do you know of a place where this functionality of PlotRange is documented?
            $endgroup$
            – Lukas Lang
            Mar 23 at 13:04










          • $begingroup$
            @Lukas, I do not believe it is documented, but it's been around for a long while.
            $endgroup$
            – J. M. is away
            Mar 23 at 13:07
















          • $begingroup$
            I didn't know how to get the PlotRange of the object. Simple! Thanks so much. (Accept)
            $endgroup$
            – David G. Stork
            Mar 23 at 7:32










          • $begingroup$
            Another way of finding the center of the eyeball is with EntityValue[eyeball, "EnclosingSphere"][[1]].
            $endgroup$
            – Roman
            Mar 23 at 12:55










          • $begingroup$
            @J.M. Do you know of a place where this functionality of PlotRange is documented?
            $endgroup$
            – Lukas Lang
            Mar 23 at 13:04










          • $begingroup$
            @Lukas, I do not believe it is documented, but it's been around for a long while.
            $endgroup$
            – J. M. is away
            Mar 23 at 13:07















          $begingroup$
          I didn't know how to get the PlotRange of the object. Simple! Thanks so much. (Accept)
          $endgroup$
          – David G. Stork
          Mar 23 at 7:32




          $begingroup$
          I didn't know how to get the PlotRange of the object. Simple! Thanks so much. (Accept)
          $endgroup$
          – David G. Stork
          Mar 23 at 7:32












          $begingroup$
          Another way of finding the center of the eyeball is with EntityValue[eyeball, "EnclosingSphere"][[1]].
          $endgroup$
          – Roman
          Mar 23 at 12:55




          $begingroup$
          Another way of finding the center of the eyeball is with EntityValue[eyeball, "EnclosingSphere"][[1]].
          $endgroup$
          – Roman
          Mar 23 at 12:55












          $begingroup$
          @J.M. Do you know of a place where this functionality of PlotRange is documented?
          $endgroup$
          – Lukas Lang
          Mar 23 at 13:04




          $begingroup$
          @J.M. Do you know of a place where this functionality of PlotRange is documented?
          $endgroup$
          – Lukas Lang
          Mar 23 at 13:04












          $begingroup$
          @Lukas, I do not believe it is documented, but it's been around for a long while.
          $endgroup$
          – J. M. is away
          Mar 23 at 13:07




          $begingroup$
          @Lukas, I do not believe it is documented, but it's been around for a long while.
          $endgroup$
          – J. M. is away
          Mar 23 at 13:07

















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